I second the entry for the SNES Model 2/Super Mario World 2 Yoshi's Island, as I have that exact box sitting on my shelf :)
I have seen that a special Metroid/GameCube bundle exists, and when I was in the UK I saw some special XBOX/game combo packages, one of which was an Indiana Jones (Infernal Machine?? don't know about that 'cuz it's getting to be an older PC title) combo.